Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.54■□□□□ 0.4
DSC1Q08554 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.54■□□□□ 0.4
DSC1Q08554 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.54■□□□□ 0.4
DSC1Q08554 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.54■□□□□ 0.4
DSC1Q08554 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DSC1Q08554 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DSC1Q08554 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.54■□□□□ 0.4
DSC1Q08554 AC005915.1-201ENST00000624912 2018 ntBASIC17.54■□□□□ 0.4
DSC1Q08554 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DSC1Q08554 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.53■□□□□ 0.4
DSC1Q08554 LETM1P2-201ENST00000597330 2178 ntBASIC17.53■□□□□ 0.4
DSC1Q08554 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.53■□□□□ 0.4
DSC1Q08554 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DSC1Q08554 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.53■□□□□ 0.4
DSC1Q08554 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.53■□□□□ 0.4
DSC1Q08554 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.53■□□□□ 0.4
DSC1Q08554 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.53■□□□□ 0.4
DSC1Q08554 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.53■□□□□ 0.4
DSC1Q08554 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 AL035252.4-201ENST00000624174 288 ntBASIC17.53■□□□□ 0.4
DSC1Q08554 AC004840.1-201ENST00000636359 365 ntBASIC17.53■□□□□ 0.4
DSC1Q08554 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DSC1Q08554 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.53■□□□□ 0.4
DSC1Q08554 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.53■□□□□ 0.4
DSC1Q08554 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.53■□□□□ 0.4
DSC1Q08554 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DSC1Q08554 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.53■□□□□ 0.4
DSC1Q08554 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DSC1Q08554 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DSC1Q08554 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.52■□□□□ 0.4
DSC1Q08554 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 BCL2-203ENST00000589955 5011 ntBASIC17.52■□□□□ 0.4
DSC1Q08554 PCDHB18P-201ENST00000524813 2368 ntBASIC17.52■□□□□ 0.4
DSC1Q08554 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.52■□□□□ 0.4
DSC1Q08554 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
DSC1Q08554 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 SPDYE17-201ENST00000412399 783 ntBASIC17.52■□□□□ 0.4
DSC1Q08554 AC005034.1-201ENST00000426657 489 ntBASIC17.52■□□□□ 0.4
DSC1Q08554 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.52■□□□□ 0.4
DSC1Q08554 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.52■□□□□ 0.4
DSC1Q08554 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.52■□□□□ 0.4
DSC1Q08554 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 AL662799.1-202ENST00000614205 422 ntBASIC17.52■□□□□ 0.4
DSC1Q08554 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
DSC1Q08554 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DSC1Q08554 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.52■□□□□ 0.4
DSC1Q08554 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DSC1Q08554 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DSC1Q08554 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DSC1Q08554 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
DSC1Q08554 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DSC1Q08554 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.52■□□□□ 0.39
DSC1Q08554 PCGF3-213ENST00000620529 1899 ntBASIC17.52■□□□□ 0.39
DSC1Q08554 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
DSC1Q08554 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
DSC1Q08554 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.52■□□□□ 0.39
DSC1Q08554 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
DSC1Q08554 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DSC1Q08554 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DSC1Q08554 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.51■□□□□ 0.39
DSC1Q08554 HCG11-201ENST00000411553 5696 ntBASIC17.51■□□□□ 0.39
DSC1Q08554 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DSC1Q08554 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DSC1Q08554 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DSC1Q08554 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
DSC1Q08554 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DSC1Q08554 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.51■□□□□ 0.39
DSC1Q08554 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DSC1Q08554 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms