Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDKL1Q00532 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.41■□□□□ 0.22
CDKL1Q00532 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.41■□□□□ 0.22
CDKL1Q00532 AP002469.2-201ENST00000531724 424 ntBASIC16.41■□□□□ 0.22
CDKL1Q00532 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
CDKL1Q00532 AC005412.3-201ENST00000580309 715 ntBASIC16.41■□□□□ 0.22
CDKL1Q00532 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.41■□□□□ 0.22
CDKL1Q00532 AL773604.1-201ENST00000617417 272 ntBASIC16.41■□□□□ 0.22
CDKL1Q00532 AC148477.8-201ENST00000624298 468 ntBASIC16.41■□□□□ 0.22
CDKL1Q00532 AC131009.4-201ENST00000624048 1740 ntBASIC16.41■□□□□ 0.22
CDKL1Q00532 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKL1Q00532 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKL1Q00532 AP002414.3-201ENST00000589352 1468 ntBASIC16.41■□□□□ 0.22
CDKL1Q00532 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.41■□□□□ 0.22
CDKL1Q00532 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKL1Q00532 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDKL1Q00532 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL1Q00532 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDKL1Q00532 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CDKL1Q00532 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKL1Q00532 FER1L4-210ENST00000615531 5998 ntBASIC16.4■□□□□ 0.22
CDKL1Q00532 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDKL1Q00532 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKL1Q00532 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKL1Q00532 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKL1Q00532 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKL1Q00532 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKL1Q00532 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKL1Q00532 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.4■□□□□ 0.22
CDKL1Q00532 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKL1Q00532 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKL1Q00532 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 SNX33P1-201ENST00000592116 1762 ntBASIC16.4■□□□□ 0.22
CDKL1Q00532 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKL1Q00532 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKL1Q00532 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKL1Q00532 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDKL1Q00532 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDKL1Q00532 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.39■□□□□ 0.22
CDKL1Q00532 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.39■□□□□ 0.21
CDKL1Q00532 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.39■□□□□ 0.21
CDKL1Q00532 AC092364.2-201ENST00000596710 2692 ntBASIC16.39■□□□□ 0.21
CDKL1Q00532 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 MRPL20P1-201ENST00000400819 433 ntBASIC16.39■□□□□ 0.21
CDKL1Q00532 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.39■□□□□ 0.21
CDKL1Q00532 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.39■□□□□ 0.21
CDKL1Q00532 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.39■□□□□ 0.21
CDKL1Q00532 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKL1Q00532 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.39■□□□□ 0.21
CDKL1Q00532 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKL1Q00532 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms