Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SEC61A1P61619 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 LINC02228-204ENST00000642115 2962 ntBASIC14.65□□□□□ -0.06
SEC61A1P61619 AC092384.3-202ENST00000564646 2873 ntBASIC14.65□□□□□ -0.06
SEC61A1P61619 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SEC61A1P61619 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SEC61A1P61619 AC004817.3-201ENST00000602957 2129 ntBASIC14.65□□□□□ -0.06
SEC61A1P61619 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SEC61A1P61619 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.65□□□□□ -0.06
SEC61A1P61619 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.65□□□□□ -0.06
SEC61A1P61619 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.65□□□□□ -0.06
SEC61A1P61619 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 SCARNA2-201ENST00000458748 420 ntBASIC14.65□□□□□ -0.06
SEC61A1P61619 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.65□□□□□ -0.06
SEC61A1P61619 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.65□□□□□ -0.06
SEC61A1P61619 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.65□□□□□ -0.06
SEC61A1P61619 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.65□□□□□ -0.06
SEC61A1P61619 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.65□□□□□ -0.06
SEC61A1P61619 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SEC61A1P61619 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 RNF216P1-203ENST00000404404 2427 ntBASIC14.65□□□□□ -0.06
SEC61A1P61619 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SEC61A1P61619 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.65□□□□□ -0.06
SEC61A1P61619 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.65□□□□□ -0.06
SEC61A1P61619 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61A1P61619 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SEC61A1P61619 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.64□□□□□ -0.07
SEC61A1P61619 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 AC063926.3-201ENST00000624734 5658 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 AC078925.2-201ENST00000624013 1973 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SEC61A1P61619 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.64□□□□□ -0.07
SEC61A1P61619 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.64□□□□□ -0.07
SEC61A1P61619 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 BX005266.1-201ENST00000473402 457 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SEC61A1P61619 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 NKAPP1-205ENST00000585790 367 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 AC064862.7-201ENST00000604520 867 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 AC120114.3-201ENST00000611923 658 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 MIR7706-201ENST00000613747 67 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 AD001527.2-201ENST00000622994 785 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.64□□□□□ -0.07
SEC61A1P61619 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms