Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 AC104076.2-201ENST00000448912 469 ntBASIC13.62□□□□□ -0.23
SPCS3P61009 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SPCS3P61009 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.62□□□□□ -0.23
SPCS3P61009 DUX4L17-201ENST00000557360 1267 ntBASIC13.62□□□□□ -0.23
SPCS3P61009 AC104640.1-201ENST00000562617 2109 ntBASIC13.62□□□□□ -0.23
SPCS3P61009 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.62□□□□□ -0.23
SPCS3P61009 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.62□□□□□ -0.23
SPCS3P61009 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.62□□□□□ -0.23
SPCS3P61009 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.62□□□□□ -0.23
SPCS3P61009 DBET-201ENST00000630918 3363 ntBASIC13.62□□□□□ -0.23
SPCS3P61009 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 ALOX12P2-203ENST00000570921 1945 ntBASIC13.62□□□□□ -0.23
SPCS3P61009 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SPCS3P61009 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
SPCS3P61009 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 PMPCAP1-201ENST00000508114 1576 ntBASIC13.62□□□□□ -0.23
SPCS3P61009 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SPCS3P61009 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SPCS3P61009 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.62□□□□□ -0.23
SPCS3P61009 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS3P61009 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.61□□□□□ -0.23
SPCS3P61009 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 MIR600HG-201ENST00000449175 5984 ntBASIC13.61□□□□□ -0.23
SPCS3P61009 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.61□□□□□ -0.23
SPCS3P61009 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.61□□□□□ -0.23
SPCS3P61009 CHCHD2P8-201ENST00000429873 447 ntBASIC13.61□□□□□ -0.23
SPCS3P61009 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.61□□□□□ -0.23
SPCS3P61009 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 NUS1P1-201ENST00000446295 882 ntBASIC13.61□□□□□ -0.23
SPCS3P61009 BX276092.5-203ENST00000456199 560 ntBASIC13.61□□□□□ -0.23
SPCS3P61009 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.61□□□□□ -0.23
SPCS3P61009 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.61□□□□□ -0.23
SPCS3P61009 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.61□□□□□ -0.23
SPCS3P61009 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.61□□□□□ -0.23
SPCS3P61009 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.61□□□□□ -0.23
SPCS3P61009 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.61□□□□□ -0.23
SPCS3P61009 AL121672.3-201ENST00000608644 468 ntBASIC13.61□□□□□ -0.23
SPCS3P61009 AC066615.1-201ENST00000640911 628 ntBASIC13.61□□□□□ -0.23
SPCS3P61009 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.61□□□□□ -0.23
SPCS3P61009 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
SPCS3P61009 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.61□□□□□ -0.23
SPCS3P61009 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS3P61009 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS3P61009 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
SPCS3P61009 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS3P61009 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms