Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.8■□□□□ 0.28
WNT3AP56704 PCGF3-213ENST00000620529 1899 ntBASIC16.8■□□□□ 0.28
WNT3AP56704 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.8■□□□□ 0.28
WNT3AP56704 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.8■□□□□ 0.28
WNT3AP56704 PMS2P4-201ENST00000412466 1052 ntBASIC16.8■□□□□ 0.28
WNT3AP56704 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.8■□□□□ 0.28
WNT3AP56704 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
WNT3AP56704 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
WNT3AP56704 MIR3909-201ENST00000579518 119 ntBASIC16.8■□□□□ 0.28
WNT3AP56704 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.8■□□□□ 0.28
WNT3AP56704 AC021097.1-201ENST00000607902 574 ntBASIC16.8■□□□□ 0.28
WNT3AP56704 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
WNT3AP56704 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
WNT3AP56704 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
WNT3AP56704 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.8■□□□□ 0.28
WNT3AP56704 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
WNT3AP56704 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3AP56704 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
WNT3AP56704 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.79■□□□□ 0.28
WNT3AP56704 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.79■□□□□ 0.28
WNT3AP56704 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
WNT3AP56704 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.79■□□□□ 0.28
WNT3AP56704 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.79■□□□□ 0.28
WNT3AP56704 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.79■□□□□ 0.28
WNT3AP56704 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.79■□□□□ 0.28
WNT3AP56704 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.79■□□□□ 0.28
WNT3AP56704 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
WNT3AP56704 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.79■□□□□ 0.28
WNT3AP56704 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.79■□□□□ 0.28
WNT3AP56704 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.79■□□□□ 0.28
WNT3AP56704 AC020765.3-201ENST00000613051 740 ntBASIC16.79■□□□□ 0.28
WNT3AP56704 AL513190.1-201ENST00000621254 727 ntBASIC16.79■□□□□ 0.28
WNT3AP56704 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.79■□□□□ 0.28
WNT3AP56704 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
WNT3AP56704 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WNT3AP56704 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.78■□□□□ 0.28
WNT3AP56704 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.78■□□□□ 0.28
WNT3AP56704 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
WNT3AP56704 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
WNT3AP56704 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
WNT3AP56704 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
WNT3AP56704 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms