Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HCFC1P51610 AC007431.3-201ENST00000623221 587 ntBASIC14.4□□□□□ -0.1
HCFC1P51610 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCFC1P51610 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCFC1P51610 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.4□□□□□ -0.1
HCFC1P51610 AC022211.2-201ENST00000585075 2527 ntBASIC14.4□□□□□ -0.1
HCFC1P51610 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.4□□□□□ -0.1
HCFC1P51610 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCFC1P51610 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCFC1P51610 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCFC1P51610 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.4□□□□□ -0.1
HCFC1P51610 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.4□□□□□ -0.1
HCFC1P51610 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HCFC1P51610 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.4□□□□□ -0.1
HCFC1P51610 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCFC1P51610 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCFC1P51610 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HCFC1P51610 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.39□□□□□ -0.11
HCFC1P51610 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.39□□□□□ -0.11
HCFC1P51610 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.39□□□□□ -0.11
HCFC1P51610 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
HCFC1P51610 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.39□□□□□ -0.11
HCFC1P51610 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.39□□□□□ -0.11
HCFC1P51610 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.39□□□□□ -0.11
HCFC1P51610 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.39□□□□□ -0.11
HCFC1P51610 CHCHD2P3-201ENST00000603038 451 ntBASIC14.39□□□□□ -0.11
HCFC1P51610 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.39□□□□□ -0.11
HCFC1P51610 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.39□□□□□ -0.11
HCFC1P51610 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 KRT8P12-202ENST00000472924 1397 ntBASIC14.39□□□□□ -0.11
HCFC1P51610 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HCFC1P51610 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.39□□□□□ -0.11
HCFC1P51610 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.39□□□□□ -0.11
HCFC1P51610 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HCFC1P51610 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.39□□□□□ -0.11
HCFC1P51610 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HCFC1P51610 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 AC124947.2-201ENST00000547118 1133 ntBASIC14.39□□□□□ -0.11
HCFC1P51610 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCFC1P51610 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.39□□□□□ -0.11
HCFC1P51610 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HCFC1P51610 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.38□□□□□ -0.11
HCFC1P51610 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.38□□□□□ -0.11
HCFC1P51610 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HCFC1P51610 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HCFC1P51610 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HCFC1P51610 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.38□□□□□ -0.11
HCFC1P51610 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HCFC1P51610 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.38□□□□□ -0.11
HCFC1P51610 AL035456.1-201ENST00000456064 1369 ntBASIC14.38□□□□□ -0.11
HCFC1P51610 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.38□□□□□ -0.11
HCFC1P51610 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HCFC1P51610 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HCFC1P51610 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms