Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.9■□□□□ 0.14
PRIM2P49643 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.9■□□□□ 0.14
PRIM2P49643 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.9■□□□□ 0.14
PRIM2P49643 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
PRIM2P49643 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PRIM2P49643 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.89■□□□□ 0.13
PRIM2P49643 UNC93B7-201ENST00000509439 705 ntBASIC15.89■□□□□ 0.13
PRIM2P49643 AF238378.1-201ENST00000526806 358 ntBASIC15.89■□□□□ 0.13
PRIM2P49643 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.89■□□□□ 0.13
PRIM2P49643 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 TERC-201ENST00000602385 541 ntBASIC15.89■□□□□ 0.13
PRIM2P49643 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.89■□□□□ 0.13
PRIM2P49643 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PRIM2P49643 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PRIM2P49643 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 AC092364.2-201ENST00000596710 2692 ntBASIC15.89■□□□□ 0.13
PRIM2P49643 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.89■□□□□ 0.13
PRIM2P49643 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PRIM2P49643 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRIM2P49643 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
PRIM2P49643 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.88■□□□□ 0.13
PRIM2P49643 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PRIM2P49643 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.88■□□□□ 0.13
PRIM2P49643 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PRIM2P49643 AC006557.2-201ENST00000592985 1240 ntBASIC15.88■□□□□ 0.13
PRIM2P49643 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 AC004706.3-202ENST00000621574 984 ntBASIC15.88■□□□□ 0.13
PRIM2P49643 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.88■□□□□ 0.13
PRIM2P49643 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.88■□□□□ 0.13
PRIM2P49643 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms