Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NARF-205ENST00000412079 1760 ntTSL 5 BASIC11.25□□□□□ -0.61
PCP4P48539 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 FAM90A11P-201ENST00000518378 2218 ntBASIC11.25□□□□□ -0.61
PCP4P48539 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 AL357054.4-201ENST00000606285 2814 ntBASIC11.25□□□□□ -0.61
PCP4P48539 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.25□□□□□ -0.61
PCP4P48539 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 MAX-212ENST00000555932 1673 ntTSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 AC111170.3-201ENST00000624282 2464 ntBASIC11.24□□□□□ -0.61
PCP4P48539 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 STRCP1-201ENST00000509801 5328 ntBASIC11.24□□□□□ -0.61
PCP4P48539 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
PCP4P48539 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PCP4P48539 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.24□□□□□ -0.61
PCP4P48539 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
PCP4P48539 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
PCP4P48539 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
PCP4P48539 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.23□□□□□ -0.61
PCP4P48539 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
PCP4P48539 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.23□□□□□ -0.61
PCP4P48539 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.23□□□□□ -0.61
PCP4P48539 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.23□□□□□ -0.61
PCP4P48539 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 AC004241.5-201ENST00000623870 2448 ntBASIC11.23□□□□□ -0.61
PCP4P48539 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.23□□□□□ -0.61
PCP4P48539 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
PCP4P48539 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
PCP4P48539 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PCP4P48539 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms