Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 FOSL1P1-201ENST00000511041 816 ntBASIC15.51■□□□□ 0.07
TNFRSF1BP20333 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TNFRSF1BP20333 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 KRT16P4-201ENST00000453883 522 ntBASIC15.5■□□□□ 0.07
TNFRSF1BP20333 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 AL139424.1-201ENST00000607572 797 ntBASIC15.5■□□□□ 0.07
TNFRSF1BP20333 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.5■□□□□ 0.07
TNFRSF1BP20333 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 AL603832.2-201ENST00000566195 2125 ntBASIC15.5■□□□□ 0.07
TNFRSF1BP20333 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFRSF1BP20333 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 DBET-201ENST00000630918 3363 ntBASIC15.49■□□□□ 0.07
TNFRSF1BP20333 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 PAWRP1-201ENST00000451083 565 ntBASIC15.49■□□□□ 0.07
TNFRSF1BP20333 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 AC106795.1-205ENST00000512851 1056 ntBASIC15.49■□□□□ 0.07
TNFRSF1BP20333 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 MPDU1-223ENST00000582151 728 ntBASIC15.49■□□□□ 0.07
TNFRSF1BP20333 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.49■□□□□ 0.07
TNFRSF1BP20333 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFRSF1BP20333 AL356309.3-201ENST00000624132 1934 ntBASIC15.49■□□□□ 0.07
TNFRSF1BP20333 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms