Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B1P20020 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2B1P20020 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ATP2B1P20020 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP2B1P20020 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ATP2B1P20020 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ATP2B1P20020 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP2B1P20020 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 IGHV3-22-201ENST00000520721 359 ntBASIC19.22■□□□□ 0.67
ATP2B1P20020 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ATP2B1P20020 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.22■□□□□ 0.67
ATP2B1P20020 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP2B1P20020 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ATP2B1P20020 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 AC131009.4-201ENST00000624048 1740 ntBASIC19.22■□□□□ 0.67
ATP2B1P20020 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATP2B1P20020 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2B1P20020 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP2B1P20020 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B1P20020 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATP2B1P20020 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2B1P20020 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2B1P20020 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2B1P20020 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
ATP2B1P20020 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2B1P20020 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
ATP2B1P20020 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP2B1P20020 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATP2B1P20020 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
ATP2B1P20020 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2B1P20020 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATP2B1P20020 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B1P20020 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATP2B1P20020 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2B1P20020 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
ATP2B1P20020 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B1P20020 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B1P20020 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B1P20020 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B1P20020 CICP6-201ENST00000457191 2729 ntBASIC19.2■□□□□ 0.66
ATP2B1P20020 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATP2B1P20020 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B1P20020 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B1P20020 AC104109.2-201ENST00000602919 1418 ntBASIC19.2■□□□□ 0.66
ATP2B1P20020 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B1P20020 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2B1P20020 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B1P20020 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B1P20020 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B1P20020 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2B1P20020 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B1P20020 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B1P20020 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B1P20020 AC129492.6-201ENST00000611383 1305 ntBASIC19.2■□□□□ 0.66
ATP2B1P20020 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B1P20020 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms