Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL2P13500 AC005052.1-201ENST00000625181 2492 ntBASIC14.52□□□□□ -0.08
CCL2P13500 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CCL2P13500 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL2P13500 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL2P13500 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL2P13500 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCL2P13500 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL2P13500 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL2P13500 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL2P13500 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.52□□□□□ -0.09
CCL2P13500 PDPK2P-202ENST00000562415 1191 ntBASIC14.52□□□□□ -0.09
CCL2P13500 AC040169.1-201ENST00000565382 521 ntBASIC14.52□□□□□ -0.09
CCL2P13500 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL2P13500 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL2P13500 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCL2P13500 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL2P13500 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL2P13500 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL2P13500 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCL2P13500 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL2P13500 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 ALOX12P2-203ENST00000570921 1945 ntBASIC14.51□□□□□ -0.09
CCL2P13500 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL2P13500 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL2P13500 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 AC074386.1-202ENST00000463561 864 ntBASIC14.51□□□□□ -0.09
CCL2P13500 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL2P13500 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.51□□□□□ -0.09
CCL2P13500 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.51□□□□□ -0.09
CCL2P13500 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 AL512652.2-201ENST00000625156 1716 ntBASIC14.51□□□□□ -0.09
CCL2P13500 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.51□□□□□ -0.09
CCL2P13500 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL2P13500 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL2P13500 AC006538.1-201ENST00000567905 1585 ntBASIC14.51□□□□□ -0.09
CCL2P13500 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCL2P13500 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL2P13500 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL2P13500 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CCL2P13500 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL2P13500 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 KRT8P39-201ENST00000396270 1433 ntBASIC14.5□□□□□ -0.09
CCL2P13500 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCL2P13500 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCL2P13500 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL2P13500 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.5□□□□□ -0.09
CCL2P13500 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CCL2P13500 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.5□□□□□ -0.09
CCL2P13500 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CCL2P13500 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.5□□□□□ -0.09
CCL2P13500 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL2P13500 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.5□□□□□ -0.09
CCL2P13500 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.5□□□□□ -0.09
CCL2P13500 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.5□□□□□ -0.09
CCL2P13500 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CCL2P13500 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL2P13500 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms