Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.34■□□□□ 0.05
BMP4P12644 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 AP002414.2-201ENST00000591780 3365 ntBASIC15.34■□□□□ 0.05
BMP4P12644 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BMP4P12644 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.34■□□□□ 0.05
BMP4P12644 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 SCARNA2-201ENST00000458748 420 ntBASIC15.34■□□□□ 0.05
BMP4P12644 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.34■□□□□ 0.05
BMP4P12644 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.34■□□□□ 0.05
BMP4P12644 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.34■□□□□ 0.05
BMP4P12644 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.34■□□□□ 0.05
BMP4P12644 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.34■□□□□ 0.05
BMP4P12644 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.34■□□□□ 0.05
BMP4P12644 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BMP4P12644 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
BMP4P12644 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BMP4P12644 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BMP4P12644 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.34■□□□□ 0.05
BMP4P12644 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BMP4P12644 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
BMP4P12644 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.33■□□□□ 0.05
BMP4P12644 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
BMP4P12644 TP73-AS1-210ENST00000637775 1455 ntBASIC15.33■□□□□ 0.05
BMP4P12644 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.33■□□□□ 0.05
BMP4P12644 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BMP4P12644 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.33■□□□□ 0.05
BMP4P12644 ALOX12P2-203ENST00000570921 1945 ntBASIC15.33■□□□□ 0.05
BMP4P12644 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 RPS2P28-201ENST00000314255 741 ntBASIC15.33■□□□□ 0.04
BMP4P12644 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.33■□□□□ 0.04
BMP4P12644 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.33■□□□□ 0.04
BMP4P12644 DDX43P3-201ENST00000441064 443 ntBASIC15.33■□□□□ 0.04
BMP4P12644 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 AF186996.4-201ENST00000467186 377 ntBASIC15.33■□□□□ 0.04
BMP4P12644 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.33■□□□□ 0.04
BMP4P12644 AP002469.2-201ENST00000531724 424 ntBASIC15.33■□□□□ 0.04
BMP4P12644 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.33■□□□□ 0.04
BMP4P12644 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.33■□□□□ 0.04
BMP4P12644 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.33■□□□□ 0.04
BMP4P12644 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.33■□□□□ 0.04
BMP4P12644 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.33■□□□□ 0.04
BMP4P12644 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 BNIP3P18-201ENST00000593976 575 ntBASIC15.33■□□□□ 0.04
BMP4P12644 AC244517.3-201ENST00000616254 1235 ntBASIC15.33■□□□□ 0.04
BMP4P12644 AL589935.2-201ENST00000616471 1231 ntBASIC15.33■□□□□ 0.04
BMP4P12644 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.33■□□□□ 0.04
BMP4P12644 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.33■□□□□ 0.04
BMP4P12644 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.33■□□□□ 0.04
BMP4P12644 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
BMP4P12644 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 AL009178.2-201ENST00000597278 2719 ntBASIC15.33■□□□□ 0.04
BMP4P12644 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.33■□□□□ 0.04
BMP4P12644 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
BMP4P12644 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.33■□□□□ 0.04
BMP4P12644 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.33■□□□□ 0.04
BMP4P12644 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.33■□□□□ 0.04
BMP4P12644 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.33■□□□□ 0.04
BMP4P12644 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
BMP4P12644 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BMP4P12644 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.32■□□□□ 0.04
BMP4P12644 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BMP4P12644 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms