Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.53■□□□□ 0.72
TOP1P11387 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 AL671710.1-201ENST00000610245 2349 ntBASIC19.53■□□□□ 0.72
TOP1P11387 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TOP1P11387 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.53■□□□□ 0.72
TOP1P11387 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.53■□□□□ 0.72
TOP1P11387 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.53■□□□□ 0.72
TOP1P11387 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.53■□□□□ 0.72
TOP1P11387 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.53■□□□□ 0.72
TOP1P11387 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.53■□□□□ 0.72
TOP1P11387 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.53■□□□□ 0.72
TOP1P11387 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TOP1P11387 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TOP1P11387 AC243562.1-201ENST00000560672 389 ntBASIC19.53■□□□□ 0.72
TOP1P11387 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.53■□□□□ 0.72
TOP1P11387 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.53■□□□□ 0.72
TOP1P11387 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TOP1P11387 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.53■□□□□ 0.72
TOP1P11387 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TOP1P11387 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TOP1P11387 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TOP1P11387 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TOP1P11387 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TOP1P11387 UBALD1-205ENST00000590891 2641 ntBASIC19.53■□□□□ 0.72
TOP1P11387 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP1P11387 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
TOP1P11387 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.52■□□□□ 0.72
TOP1P11387 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
TOP1P11387 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.52■□□□□ 0.72
TOP1P11387 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TOP1P11387 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 KRT8P39-201ENST00000396270 1433 ntBASIC19.52■□□□□ 0.72
TOP1P11387 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TOP1P11387 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.52■□□□□ 0.72
TOP1P11387 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TOP1P11387 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.52■□□□□ 0.72
TOP1P11387 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.52■□□□□ 0.72
TOP1P11387 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.52■□□□□ 0.72
TOP1P11387 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.52■□□□□ 0.72
TOP1P11387 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TOP1P11387 AC079140.1-201ENST00000508039 487 ntBASIC19.52■□□□□ 0.72
TOP1P11387 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 AC027612.4-201ENST00000605371 583 ntBASIC19.52■□□□□ 0.72
TOP1P11387 AL139011.1-202ENST00000642063 584 ntBASIC19.52■□□□□ 0.72
TOP1P11387 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.52■□□□□ 0.72
TOP1P11387 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOP1P11387 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TOP1P11387 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.52■□□□□ 0.71
TOP1P11387 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TOP1P11387 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TOP1P11387 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
TOP1P11387 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TOP1P11387 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TOP1P11387 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.51■□□□□ 0.71
TOP1P11387 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.51■□□□□ 0.71
TOP1P11387 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms