Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 AC131009.4-201ENST00000624048 1740 ntBASIC17.5■□□□□ 0.39
RARAP10276 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RARAP10276 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.5■□□□□ 0.39
RARAP10276 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.5■□□□□ 0.39
RARAP10276 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.5■□□□□ 0.39
RARAP10276 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.5■□□□□ 0.39
RARAP10276 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.5■□□□□ 0.39
RARAP10276 AC091167.2-201ENST00000579581 588 ntBASIC17.5■□□□□ 0.39
RARAP10276 AC117500.6-201ENST00000624871 588 ntBASIC17.5■□□□□ 0.39
RARAP10276 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RARAP10276 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.5■□□□□ 0.39
RARAP10276 AL671710.1-201ENST00000610245 2349 ntBASIC17.5■□□□□ 0.39
RARAP10276 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RARAP10276 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
RARAP10276 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RARAP10276 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RARAP10276 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 AL365203.3-201ENST00000609742 2057 ntBASIC17.49■□□□□ 0.39
RARAP10276 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 HYMAI-201ENST00000635591 3347 ntBASIC17.49■□□□□ 0.39
RARAP10276 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.49■□□□□ 0.39
RARAP10276 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
RARAP10276 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 AC092910.1-201ENST00000482027 1129 ntBASIC17.49■□□□□ 0.39
RARAP10276 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.49■□□□□ 0.39
RARAP10276 RNA5SP419-201ENST00000515908 135 ntBASIC17.49■□□□□ 0.39
RARAP10276 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 OR7E47P-204ENST00000575924 449 ntBASIC17.49■□□□□ 0.39
RARAP10276 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
RARAP10276 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.49■□□□□ 0.39
RARAP10276 PAUPAR-201ENST00000630360 2965 ntBASIC17.49■□□□□ 0.39
RARAP10276 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.49■□□□□ 0.39
RARAP10276 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.49■□□□□ 0.39
RARAP10276 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.49■□□□□ 0.39
RARAP10276 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 CROCCP1-201ENST00000426910 5675 ntBASIC17.49■□□□□ 0.39
RARAP10276 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.49■□□□□ 0.39
RARAP10276 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RARAP10276 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.49■□□□□ 0.39
RARAP10276 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RARAP10276 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RARAP10276 AC129492.6-201ENST00000611383 1305 ntBASIC17.48■□□□□ 0.39
RARAP10276 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RARAP10276 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.48■□□□□ 0.39
RARAP10276 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.48■□□□□ 0.39
RARAP10276 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RARAP10276 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RARAP10276 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RARAP10276 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RARAP10276 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.48■□□□□ 0.39
RARAP10276 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RARAP10276 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RARAP10276 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.48■□□□□ 0.39
RARAP10276 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.48■□□□□ 0.39
RARAP10276 AC108073.2-201ENST00000464002 357 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms