Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DPB1P04440 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DPB1P04440 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DPB1P04440 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPB1P04440 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HLA-DPB1P04440 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 AC122714.2-201ENST00000502787 707 ntBASIC15.03■□□□□ -0
HLA-DPB1P04440 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPB1P04440 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.03■□□□□ -0
HLA-DPB1P04440 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.03■□□□□ -0
HLA-DPB1P04440 STK25P1-201ENST00000585406 838 ntBASIC15.03■□□□□ -0
HLA-DPB1P04440 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.03■□□□□ -0
HLA-DPB1P04440 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DPB1P04440 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HLA-DPB1P04440 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DPB1P04440 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 AL049757.1-201ENST00000616842 1596 ntBASIC15.02■□□□□ -0
HLA-DPB1P04440 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
HLA-DPB1P04440 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DPB1P04440 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DPB1P04440 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DPB1P04440 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPB1P04440 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DPB1P04440 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DPB1P04440 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DPB1P04440 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DPB1P04440 AC011467.2-201ENST00000598425 242 ntBASIC15.02■□□□□ -0
HLA-DPB1P04440 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DPB1P04440 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPB1P04440 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 KRT18P56-201ENST00000507275 550 ntBASIC15.01□□□□□ -0.01
HLA-DPB1P04440 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 PRELID1P1-202ENST00000567272 903 ntBASIC15.01□□□□□ -0.01
HLA-DPB1P04440 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms