Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
LCATP04180 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LCATP04180 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.61□□□□□ -0.07
LCATP04180 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCATP04180 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.61□□□□□ -0.07
LCATP04180 AC131009.4-201ENST00000624048 1740 ntBASIC14.61□□□□□ -0.07
LCATP04180 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 MRPL20P1-201ENST00000400819 433 ntBASIC14.6□□□□□ -0.07
LCATP04180 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.6□□□□□ -0.07
LCATP04180 TPM4P1-201ENST00000436100 807 ntBASIC14.6□□□□□ -0.07
LCATP04180 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.6□□□□□ -0.07
LCATP04180 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 AC104692.2-201ENST00000603054 253 ntBASIC14.6□□□□□ -0.07
LCATP04180 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.6□□□□□ -0.07
LCATP04180 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LCATP04180 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.6□□□□□ -0.07
LCATP04180 AL139011.1-202ENST00000642063 584 ntBASIC14.6□□□□□ -0.07
LCATP04180 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LCATP04180 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LCATP04180 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LCATP04180 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.6□□□□□ -0.07
LCATP04180 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.6□□□□□ -0.07
LCATP04180 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LCATP04180 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCATP04180 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.59□□□□□ -0.07
LCATP04180 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
LCATP04180 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.59□□□□□ -0.07
LCATP04180 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LCATP04180 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 AL353732.1-201ENST00000569618 1459 ntBASIC14.59□□□□□ -0.07
LCATP04180 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.59□□□□□ -0.07
LCATP04180 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.59□□□□□ -0.07
LCATP04180 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.59□□□□□ -0.07
LCATP04180 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.59□□□□□ -0.07
LCATP04180 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 AP001350.2-201ENST00000625104 1094 ntBASIC14.59□□□□□ -0.07
LCATP04180 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.59□□□□□ -0.07
LCATP04180 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LCATP04180 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.59□□□□□ -0.07
LCATP04180 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LCATP04180 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
LCATP04180 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LCATP04180 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LCATP04180 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LCATP04180 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LCATP04180 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LCATP04180 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCATP04180 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.58□□□□□ -0.08
LCATP04180 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LCATP04180 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCATP04180 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.58□□□□□ -0.08
LCATP04180 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.58□□□□□ -0.08
LCATP04180 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCATP04180 PMS2P1-201ENST00000431037 1228 ntBASIC14.58□□□□□ -0.08
LCATP04180 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LCATP04180 AC108073.2-201ENST00000464002 357 ntBASIC14.58□□□□□ -0.08
LCATP04180 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms