Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.79□□□□□ -0.04
APOC1P02654 TSPY19P-201ENST00000418461 509 ntBASIC14.79□□□□□ -0.04
APOC1P02654 TSPY18P-201ENST00000441642 509 ntBASIC14.79□□□□□ -0.04
APOC1P02654 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.79□□□□□ -0.04
APOC1P02654 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 AC013467.2-201ENST00000605472 835 ntBASIC14.79□□□□□ -0.04
APOC1P02654 AC008608.2-201ENST00000606089 416 ntBASIC14.79□□□□□ -0.04
APOC1P02654 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
APOC1P02654 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 AL603756.1-201ENST00000606511 2163 ntBASIC14.78□□□□□ -0.04
APOC1P02654 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.78□□□□□ -0.04
APOC1P02654 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC1P02654 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
APOC1P02654 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 TOP3BP1-201ENST00000420768 1380 ntBASIC14.78□□□□□ -0.04
APOC1P02654 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.78□□□□□ -0.04
APOC1P02654 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC1P02654 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.78□□□□□ -0.04
APOC1P02654 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
APOC1P02654 DUX4L17-201ENST00000557360 1267 ntBASIC14.78□□□□□ -0.04
APOC1P02654 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 AC064862.7-201ENST00000604520 867 ntBASIC14.78□□□□□ -0.04
APOC1P02654 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC1P02654 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APOC1P02654 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.78□□□□□ -0.04
APOC1P02654 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOC1P02654 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC1P02654 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.77□□□□□ -0.04
APOC1P02654 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
APOC1P02654 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC1P02654 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
APOC1P02654 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms