Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.09□□□□□ -0.31
TOMM40O96008 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.09□□□□□ -0.31
TOMM40O96008 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.09□□□□□ -0.31
TOMM40O96008 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 AL139424.1-201ENST00000607572 797 ntBASIC13.09□□□□□ -0.31
TOMM40O96008 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.09□□□□□ -0.31
TOMM40O96008 AL589182.2-201ENST00000619332 1049 ntBASIC13.09□□□□□ -0.31
TOMM40O96008 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
TOMM40O96008 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
TOMM40O96008 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TOMM40O96008 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TOMM40O96008 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TOMM40O96008 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TOMM40O96008 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
TOMM40O96008 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
TOMM40O96008 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.08□□□□□ -0.31
TOMM40O96008 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.08□□□□□ -0.31
TOMM40O96008 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
TOMM40O96008 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
TOMM40O96008 TOP3BP1-201ENST00000420768 1380 ntBASIC13.08□□□□□ -0.31
TOMM40O96008 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.08□□□□□ -0.31
TOMM40O96008 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
TOMM40O96008 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.08□□□□□ -0.32
TOMM40O96008 AC079328.2-201ENST00000561241 3354 ntBASIC13.08□□□□□ -0.32
TOMM40O96008 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.08□□□□□ -0.32
TOMM40O96008 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.08□□□□□ -0.32
TOMM40O96008 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.08□□□□□ -0.32
TOMM40O96008 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.08□□□□□ -0.32
TOMM40O96008 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.08□□□□□ -0.32
TOMM40O96008 KRT18P35-201ENST00000510488 1269 ntBASIC13.08□□□□□ -0.32
TOMM40O96008 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.08□□□□□ -0.32
TOMM40O96008 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 AC104640.1-201ENST00000562617 2109 ntBASIC13.08□□□□□ -0.32
TOMM40O96008 NKAPP1-205ENST00000585790 367 ntBASIC13.08□□□□□ -0.32
TOMM40O96008 AC064862.7-201ENST00000604520 867 ntBASIC13.08□□□□□ -0.32
TOMM40O96008 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TOMM40O96008 AC093458.2-201ENST00000623150 629 ntBASIC13.08□□□□□ -0.32
TOMM40O96008 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 AC007326.2-201ENST00000624224 7579 ntBASIC13.08□□□□□ -0.32
TOMM40O96008 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 TSPY26P-202ENST00000565928 3884 ntBASIC13.08□□□□□ -0.32
TOMM40O96008 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TOMM40O96008 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
TOMM40O96008 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TOMM40O96008 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TOMM40O96008 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TOMM40O96008 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TOMM40O96008 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms