Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 AC079328.2-201ENST00000561241 3354 ntBASIC7.29□□□□□ -1.24
USH2AO75445 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC7.29□□□□□ -1.24
USH2AO75445 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC7.29□□□□□ -1.24
USH2AO75445 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 AF254983.2-201ENST00000612331 135 ntBASIC7.29□□□□□ -1.24
USH2AO75445 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 FTLP1-201ENST00000449155 526 ntBASIC7.29□□□□□ -1.24
USH2AO75445 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC7.29□□□□□ -1.24
USH2AO75445 RN7SL11P-201ENST00000471305 293 ntBASIC7.29□□□□□ -1.24
USH2AO75445 HNRNPA1P13-201ENST00000510646 963 ntBASIC7.29□□□□□ -1.24
USH2AO75445 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC7.29□□□□□ -1.24
USH2AO75445 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC7.29□□□□□ -1.24
USH2AO75445 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
USH2AO75445 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 DGAT2L7P-201ENST00000602462 744 ntBASIC7.29□□□□□ -1.24
USH2AO75445 PRKN-211ENST00000615065 261 ntTSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC7.29□□□□□ -1.24
USH2AO75445 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 CYP46A4P-201ENST00000414953 267 ntBASIC7.28□□□□□ -1.24
USH2AO75445 PFN2-202ENST00000423691 911 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
USH2AO75445 VDAC1P7-201ENST00000462417 847 ntBASIC7.28□□□□□ -1.24
USH2AO75445 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC7.28□□□□□ -1.24
USH2AO75445 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
USH2AO75445 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 AL139327.4-201ENST00000612362 153 ntBASIC7.28□□□□□ -1.24
USH2AO75445 AC009084.3-201ENST00000623356 437 ntBASIC7.28□□□□□ -1.24
USH2AO75445 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 AC006001.1-201ENST00000325130 474 ntBASIC7.28□□□□□ -1.24
USH2AO75445 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms