Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 CYP2T3P-201ENST00000601990 817 ntBASIC14.86□□□□□ -0.03
PFDN1O60925 AL589743.5-201ENST00000616611 1050 ntBASIC14.86□□□□□ -0.03
PFDN1O60925 MYCNOS-205ENST00000641950 531 ntBASIC14.86□□□□□ -0.03
PFDN1O60925 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PFDN1O60925 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.85□□□□□ -0.03
PFDN1O60925 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PFDN1O60925 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 AP001330.3-201ENST00000520123 633 ntBASIC14.85□□□□□ -0.03
PFDN1O60925 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.85□□□□□ -0.03
PFDN1O60925 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
PFDN1O60925 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PFDN1O60925 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
PFDN1O60925 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PFDN1O60925 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.84□□□□□ -0.03
PFDN1O60925 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 TUBB8P6-201ENST00000436895 1288 ntBASIC14.84□□□□□ -0.03
PFDN1O60925 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.84□□□□□ -0.03
PFDN1O60925 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 AL671710.1-201ENST00000610245 2349 ntBASIC14.84□□□□□ -0.03
PFDN1O60925 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms