Protein–RNA interactions for Protein: O60613

SELENOF, Selenoprotein F, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOFO60613 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.9□□□□□ -0.02
SELENOFO60613 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.9□□□□□ -0.02
SELENOFO60613 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.9□□□□□ -0.02
SELENOFO60613 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SELENOFO60613 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.9□□□□□ -0.02
SELENOFO60613 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.9□□□□□ -0.02
SELENOFO60613 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SELENOFO60613 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SELENOFO60613 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SELENOFO60613 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.89□□□□□ -0.03
SELENOFO60613 AL512652.2-201ENST00000625156 1716 ntBASIC14.89□□□□□ -0.03
SELENOFO60613 AL596087.1-201ENST00000400979 1969 ntBASIC14.89□□□□□ -0.03
SELENOFO60613 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SELENOFO60613 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SELENOFO60613 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
SELENOFO60613 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SELENOFO60613 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 AC024909.3-201ENST00000611513 2257 ntBASIC14.89□□□□□ -0.03
SELENOFO60613 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.89□□□□□ -0.03
SELENOFO60613 FOSL1P1-201ENST00000511041 816 ntBASIC14.89□□□□□ -0.03
SELENOFO60613 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SELENOFO60613 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.89□□□□□ -0.03
SELENOFO60613 AL139288.1-201ENST00000623748 933 ntBASIC14.89□□□□□ -0.03
SELENOFO60613 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.89□□□□□ -0.03
SELENOFO60613 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.89□□□□□ -0.03
SELENOFO60613 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.89□□□□□ -0.03
SELENOFO60613 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SELENOFO60613 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.89□□□□□ -0.03
SELENOFO60613 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.89□□□□□ -0.03
SELENOFO60613 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SELENOFO60613 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.89□□□□□ -0.03
SELENOFO60613 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SELENOFO60613 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SELENOFO60613 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.88□□□□□ -0.03
SELENOFO60613 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.88□□□□□ -0.03
SELENOFO60613 AL031731.1-201ENST00000642131 2094 ntBASIC14.88□□□□□ -0.03
SELENOFO60613 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.88□□□□□ -0.03
SELENOFO60613 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.88□□□□□ -0.03
SELENOFO60613 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SELENOFO60613 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.88□□□□□ -0.03
SELENOFO60613 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.88□□□□□ -0.03
SELENOFO60613 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.88□□□□□ -0.03
SELENOFO60613 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SELENOFO60613 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.88□□□□□ -0.03
SELENOFO60613 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.88□□□□□ -0.03
SELENOFO60613 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms