Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA12O60330 AL353732.1-201ENST00000569618 1459 ntBASIC16.52■□□□□ 0.23
PCDHGA12O60330 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGA12O60330 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA12O60330 WASH6P-202ENST00000359512 1437 ntBASIC16.52■□□□□ 0.23
PCDHGA12O60330 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA12O60330 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
PCDHGA12O60330 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 MIR661-201ENST00000384842 89 ntBASIC16.51■□□□□ 0.23
PCDHGA12O60330 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 HCG4-201ENST00000418983 998 ntBASIC16.51■□□□□ 0.23
PCDHGA12O60330 TREML5P-201ENST00000421694 576 ntBASIC16.51■□□□□ 0.23
PCDHGA12O60330 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 SLC25A39P2-201ENST00000537614 270 ntBASIC16.51■□□□□ 0.23
PCDHGA12O60330 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 AC008761.3-201ENST00000624803 892 ntBASIC16.51■□□□□ 0.23
PCDHGA12O60330 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA12O60330 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA12O60330 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 UGT1A2P-201ENST00000454886 866 ntBASIC16.5■□□□□ 0.23
PCDHGA12O60330 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 LINC02560-201ENST00000596379 459 ntBASIC16.5■□□□□ 0.23
PCDHGA12O60330 AC008267.7-201ENST00000624570 1194 ntBASIC16.5■□□□□ 0.23
PCDHGA12O60330 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 UBALD1-205ENST00000590891 2641 ntBASIC16.5■□□□□ 0.23
PCDHGA12O60330 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA12O60330 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA12O60330 AC133963.1-201ENST00000504166 1679 ntBASIC16.5■□□□□ 0.23
PCDHGA12O60330 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms