Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAF3IP2O43734 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAF3IP2O43734 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TRAF3IP2O43734 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAF3IP2O43734 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 KRT19P2-202ENST00000557173 1012 ntBASIC14.83□□□□□ -0.04
TRAF3IP2O43734 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 FAM197Y3-203ENST00000618346 717 ntBASIC14.83□□□□□ -0.04
TRAF3IP2O43734 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 AC025580.3-201ENST00000617932 1424 ntBASIC14.83□□□□□ -0.04
TRAF3IP2O43734 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF3IP2O43734 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 AC005052.1-201ENST00000625181 2492 ntBASIC14.82□□□□□ -0.04
TRAF3IP2O43734 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.82□□□□□ -0.04
TRAF3IP2O43734 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 KRT18P3-201ENST00000451602 1288 ntBASIC14.82□□□□□ -0.04
TRAF3IP2O43734 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 RNA5SP416-201ENST00000516838 111 ntBASIC14.82□□□□□ -0.04
TRAF3IP2O43734 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF3IP2O43734 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms