Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.06■□□□□ 0.96
ABCC4O15439 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCC4O15439 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCC4O15439 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCC4O15439 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.05■□□□□ 0.96
ABCC4O15439 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.05■□□□□ 0.96
ABCC4O15439 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCC4O15439 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ABCC4O15439 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.05■□□□□ 0.96
ABCC4O15439 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.05■□□□□ 0.96
ABCC4O15439 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCC4O15439 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
ABCC4O15439 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.04■□□□□ 0.96
ABCC4O15439 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ABCC4O15439 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 LINC01225-203ENST00000563550 1244 ntBASIC21.04■□□□□ 0.96
ABCC4O15439 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.04■□□□□ 0.96
ABCC4O15439 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.04■□□□□ 0.96
ABCC4O15439 AC239800.4-201ENST00000603712 296 ntBASIC21.04■□□□□ 0.96
ABCC4O15439 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.04■□□□□ 0.96
ABCC4O15439 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCC4O15439 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 PCGF3-213ENST00000620529 1899 ntBASIC21.04■□□□□ 0.96
ABCC4O15439 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCC4O15439 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ABCC4O15439 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCC4O15439 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.04■□□□□ 0.96
ABCC4O15439 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 TUBB3P1-201ENST00000405796 1332 ntBASIC21.04■□□□□ 0.96
ABCC4O15439 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
ABCC4O15439 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCC4O15439 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
ABCC4O15439 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 PCDHB19P-201ENST00000570871 2371 ntBASIC21.04■□□□□ 0.96
ABCC4O15439 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.04■□□□□ 0.96
ABCC4O15439 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ABCC4O15439 RBPMS2P1-201ENST00000437762 623 ntBASIC21.04■□□□□ 0.96
ABCC4O15439 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.04■□□□□ 0.96
ABCC4O15439 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCC4O15439 AL161645.1-201ENST00000622716 1255 ntBASIC21.04■□□□□ 0.96
ABCC4O15439 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.03■□□□□ 0.96
ABCC4O15439 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ABCC4O15439 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.03■□□□□ 0.96
ABCC4O15439 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.03■□□□□ 0.96
ABCC4O15439 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.03■□□□□ 0.96
ABCC4O15439 AC055876.3-201ENST00000431496 288 ntBASIC21.03■□□□□ 0.96
ABCC4O15439 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.03■□□□□ 0.96
ABCC4O15439 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.03■□□□□ 0.96
ABCC4O15439 RNA5SP421-201ENST00000516864 134 ntBASIC21.03■□□□□ 0.96
ABCC4O15439 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.03■□□□□ 0.96
ABCC4O15439 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.03■□□□□ 0.96
ABCC4O15439 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.03■□□□□ 0.96
ABCC4O15439 AC138649.4-201ENST00000612222 287 ntBASIC21.03■□□□□ 0.96
ABCC4O15439 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.03■□□□□ 0.96
ABCC4O15439 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.03■□□□□ 0.96
ABCC4O15439 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCC4O15439 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCC4O15439 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCC4O15439 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ABCC4O15439 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ABCC4O15439 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCC4O15439 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCC4O15439 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ABCC4O15439 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCC4O15439 AC016027.1-202ENST00000607927 1699 ntBASIC21.02■□□□□ 0.96
ABCC4O15439 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms