Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
TO15178 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TO15178 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TO15178 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.33■□□□□ 0.05
TO15178 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.33■□□□□ 0.05
TO15178 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TO15178 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TO15178 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TO15178 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TO15178 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.33■□□□□ 0.05
TO15178 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TO15178 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TO15178 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.33■□□□□ 0.05
TO15178 AL162727.3-201ENST00000635661 2787 ntBASIC15.33■□□□□ 0.04
TO15178 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.33■□□□□ 0.04
TO15178 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TO15178 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 BX842568.4-201ENST00000421222 227 ntBASIC15.33■□□□□ 0.04
TO15178 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.33■□□□□ 0.04
TO15178 FAM58CP-201ENST00000435741 640 ntBASIC15.33■□□□□ 0.04
TO15178 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.33■□□□□ 0.04
TO15178 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.33■□□□□ 0.04
TO15178 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.33■□□□□ 0.04
TO15178 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
TO15178 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.33■□□□□ 0.04
TO15178 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.33■□□□□ 0.04
TO15178 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.33■□□□□ 0.04
TO15178 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.33■□□□□ 0.04
TO15178 AC092902.6-201ENST00000641783 218 ntBASIC15.33■□□□□ 0.04
TO15178 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
TO15178 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.33■□□□□ 0.04
TO15178 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.33■□□□□ 0.04
TO15178 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.33■□□□□ 0.04
TO15178 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TO15178 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TO15178 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TO15178 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TO15178 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TO15178 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
TO15178 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TO15178 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.32■□□□□ 0.04
TO15178 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.32■□□□□ 0.04
TO15178 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TO15178 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.32■□□□□ 0.04
TO15178 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TO15178 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.32■□□□□ 0.04
TO15178 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.32■□□□□ 0.04
TO15178 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.32■□□□□ 0.04
TO15178 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TO15178 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.32■□□□□ 0.04
TO15178 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
TO15178 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.32■□□□□ 0.04
TO15178 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.32■□□□□ 0.04
TO15178 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TO15178 WASH6P-202ENST00000359512 1437 ntBASIC15.32■□□□□ 0.04
TO15178 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TO15178 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TO15178 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TO15178 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TO15178 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms