Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.23■□□□□ 0.99
CHL1O00533 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.23■□□□□ 0.99
CHL1O00533 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHL1O00533 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 BANF1P1-201ENST00000553684 263 ntBASIC21.23■□□□□ 0.99
CHL1O00533 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.23■□□□□ 0.99
CHL1O00533 AC005498.2-205ENST00000593218 784 ntBASIC21.23■□□□□ 0.99
CHL1O00533 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 AC007967.4-201ENST00000614700 386 ntBASIC21.23■□□□□ 0.99
CHL1O00533 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CHL1O00533 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHL1O00533 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CHL1O00533 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHL1O00533 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHL1O00533 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHL1O00533 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.22■□□□□ 0.99
CHL1O00533 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CHL1O00533 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CHL1O00533 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHL1O00533 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CHL1O00533 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CHL1O00533 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.22■□□□□ 0.99
CHL1O00533 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CHL1O00533 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.22■□□□□ 0.99
CHL1O00533 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CHL1O00533 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHL1O00533 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHL1O00533 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHL1O00533 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHL1O00533 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHL1O00533 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.22■□□□□ 0.99
CHL1O00533 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHL1O00533 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.22■□□□□ 0.99
CHL1O00533 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CHL1O00533 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.21■□□□□ 0.99
CHL1O00533 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.21■□□□□ 0.99
CHL1O00533 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CHL1O00533 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 AC005052.1-201ENST00000625181 2492 ntBASIC21.21■□□□□ 0.99
CHL1O00533 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHL1O00533 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHL1O00533 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHL1O00533 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CHL1O00533 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.21■□□□□ 0.99
CHL1O00533 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.21■□□□□ 0.99
CHL1O00533 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHL1O00533 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.21■□□□□ 0.99
CHL1O00533 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 AC140878.1-201ENST00000565277 250 ntBASIC21.21■□□□□ 0.99
CHL1O00533 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.21■□□□□ 0.99
CHL1O00533 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHL1O00533 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHL1O00533 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHL1O00533 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.21■□□□□ 0.99
CHL1O00533 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
CHL1O00533 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CHL1O00533 LTB4R2-202ENST00000528054 3092 ntBASIC21.2■□□□□ 0.99
CHL1O00533 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
CHL1O00533 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.2■□□□□ 0.98
CHL1O00533 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.2■□□□□ 0.98
CHL1O00533 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.2■□□□□ 0.98
CHL1O00533 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.2■□□□□ 0.98
CHL1O00533 POU5F1P6-201ENST00000466990 990 ntBASIC21.2■□□□□ 0.98
CHL1O00533 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.2■□□□□ 0.98
CHL1O00533 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.2■□□□□ 0.98
CHL1O00533 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.2■□□□□ 0.98
CHL1O00533 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CHL1O00533 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.2■□□□□ 0.98
CHL1O00533 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.2■□□□□ 0.98
CHL1O00533 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
CHL1O00533 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHL1O00533 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms