Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 AC245100.5-201ENST00000452108 331 ntBASIC21.92■■□□□ 1.1
PIK3C2AO00443 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 Z97205.2-201ENST00000564697 1639 ntBASIC21.92■■□□□ 1.1
PIK3C2AO00443 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 CLK3P2-201ENST00000427566 1453 ntBASIC21.92■■□□□ 1.1
PIK3C2AO00443 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3C2AO00443 U82695.1-201ENST00000635752 1889 ntBASIC21.92■■□□□ 1.1
PIK3C2AO00443 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PIK3C2AO00443 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 AC007389.4-201ENST00000454674 793 ntBASIC21.91■■□□□ 1.1
PIK3C2AO00443 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 RAB43P1-201ENST00000561790 589 ntBASIC21.91■■□□□ 1.1
PIK3C2AO00443 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PIK3C2AO00443 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIK3C2AO00443 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 AC022494.1-201ENST00000466044 728 ntBASIC21.9■■□□□ 1.1
PIK3C2AO00443 AC011495.1-201ENST00000498085 584 ntBASIC21.9■■□□□ 1.1
PIK3C2AO00443 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 MIR4259-201ENST00000584466 101 ntBASIC21.9■■□□□ 1.1
PIK3C2AO00443 AC010319.3-201ENST00000597028 470 ntBASIC21.9■■□□□ 1.1
PIK3C2AO00443 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.9■■□□□ 1.1
PIK3C2AO00443 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PIK3C2AO00443 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PIK3C2AO00443 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PIK3C2AO00443 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PIK3C2AO00443 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PIK3C2AO00443 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.89■■□□□ 1.1
PIK3C2AO00443 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.89■■□□□ 1.1
PIK3C2AO00443 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.89■■□□□ 1.1
PIK3C2AO00443 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.89■■□□□ 1.1
PIK3C2AO00443 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.89■■□□□ 1.1
PIK3C2AO00443 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.89■■□□□ 1.1
PIK3C2AO00443 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.89■■□□□ 1.1
PIK3C2AO00443 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.89■■□□□ 1.1
PIK3C2AO00443 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.89■■□□□ 1.1
PIK3C2AO00443 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.89■■□□□ 1.09
PIK3C2AO00443 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PIK3C2AO00443 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PIK3C2AO00443 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PIK3C2AO00443 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PIK3C2AO00443 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
PIK3C2AO00443 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms