Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 AC138761.1-201ENST00000584393 385 ntBASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 AL158211.3-201ENST00000607385 239 ntBASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 AC139713.2-201ENST00000641328 2723 ntBASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TBC1D3FA6NER0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 AL391256.1-201ENST00000443260 1855 ntBASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 AP002490.2-201ENST00000524791 560 ntBASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TBC1D3FA6NER0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TBC1D3FA6NER0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 AC073439.1-201ENST00000624121 1774 ntBASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms