Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 STK19B-204ENST00000512515 211 ntBASIC18.12■□□□□ 0.49
CCDC66A2RUB6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 AL135999.2-201ENST00000622438 1686 ntBASIC18.12■□□□□ 0.49
CCDC66A2RUB6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 AC078925.2-201ENST00000624013 1973 ntBASIC18.11■□□□□ 0.49
CCDC66A2RUB6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.11■□□□□ 0.49
CCDC66A2RUB6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 TNRC18P2-201ENST00000417666 2714 ntBASIC18.11■□□□□ 0.49
CCDC66A2RUB6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC66A2RUB6 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 AC003669.1-201ENST00000334569 611 ntBASIC18.1■□□□□ 0.49
CCDC66A2RUB6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 VENTXP7-201ENST00000475503 772 ntBASIC18.1■□□□□ 0.49
CCDC66A2RUB6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms