Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 AC131009.4-201ENST00000624048 1740 ntBASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 AL031432.2-201ENST00000566714 459 ntBASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 AL928711.1-201ENST00000570165 459 ntBASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 AC091812.2-201ENST00000619081 385 ntBASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 AL512652.2-201ENST00000625156 1716 ntBASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPDC1A2A3K4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 AC129492.6-201ENST00000611383 1305 ntBASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 AC254562.1-201ENST00000417586 456 ntBASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 AC068137.2-201ENST00000605408 478 ntBASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPDC1A2A3K4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPDC1A2A3K4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms