Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 NUS1P2-201ENST00000417358 873 ntBASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 TOP3BP1-201ENST00000420768 1380 ntBASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 KRT16P4-201ENST00000453883 522 ntBASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC069148.1-201ENST00000608741 768 ntBASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 AP001269.4-201ENST00000609611 512 ntBASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
TRBV6-7A0A0A0MS04 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV6-7A0A0A0MS04 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 ATP5G2P1-201ENST00000433580 426 ntBASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms