Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 FAAHP1-202ENST00000446499 1238 ntBASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 DUX4L17-201ENST00000557360 1267 ntBASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 AC105339.3-201ENST00000560043 636 ntBASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 GGTLC5P-201ENST00000617623 998 ntBASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 AC008735.5-201ENST00000623544 497 ntBASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 AC005593.1-201ENST00000624894 515 ntBASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 TOP3BP1-201ENST00000420768 1380 ntBASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
TRGV1A0A0A0MS02 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms