Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 API5-211ENST00000534695 560 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 AC135586.1-201ENST00000539323 574 ntBASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 AL079307.3-201ENST00000556114 283 ntBASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 BTBD7P1-201ENST00000447253 1453 ntBASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 AC138969.3-201ENST00000546612 1459 ntBASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 AC138932.2-201ENST00000548268 1459 ntBASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 AC126755.4-201ENST00000549796 1459 ntBASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 GPR53P-205ENST00000457298 1084 ntBASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 ZNF890P-202ENST00000530367 1156 ntBASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 BANF1P1-201ENST00000553684 263 ntBASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 AC013467.2-201ENST00000605472 835 ntBASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 AC004840.1-201ENST00000636359 365 ntBASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC187A0A096LP49 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 AL391825.1-201ENST00000457671 1364 ntBASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 AC087499.6-201ENST00000411576 835 ntBASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 AL080243.2-201ENST00000418783 582 ntBASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 DFFBP1-201ENST00000433250 979 ntBASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 RN7SL618P-201ENST00000477850 296 ntBASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 AL133215.2-201ENST00000609242 977 ntBASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms