Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 MIR1233-2-201ENST00000408138 82 ntBASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 MIR1233-1-201ENST00000408722 82 ntBASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 AC027601.4-201ENST00000611259 610 ntBASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 AC073592.5-201ENST00000624854 528 ntBASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 AC132938.5-201ENST00000624980 1813 ntBASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 AC009947.1-201ENST00000444350 727 ntBASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX49Q9Y6V7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
DDX49Q9Y6V7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 AC105917.1-201ENST00000506637 2539 ntBASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 SPDYE21P-201ENST00000413323 827 ntBASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 AC073592.4-201ENST00000623827 446 ntBASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 AL022326.1-202ENST00000641533 845 ntBASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 AL049757.1-201ENST00000616842 1596 ntBASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX49Q9Y6V7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms