Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 SPCS2P4-201ENST00000436160 681 ntBASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 AL009183.1-201ENST00000603760 355 ntBASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 AL161645.1-201ENST00000622716 1255 ntBASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 AC008741.2-201ENST00000612792 3115 ntBASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 AC079328.2-201ENST00000561241 3354 ntBASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDAC6Q9UBN7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 GPS2P2-201ENST00000430745 888 ntBASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 AC067863.1-201ENST00000494933 530 ntBASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC6Q9UBN7 AC005915.1-201ENST00000624912 2018 ntBASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms