Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
PARPBPQ9NWS1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 AC013467.2-201ENST00000605472 835 ntBASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.95□□□□□ -0.02
PARPBPQ9NWS1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 BCAR1-209ENST00000546196 1340 ntBASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 AL596257.1-201ENST00000641463 2694 ntBASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 POLD2P1-201ENST00000511220 997 ntBASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 AC004877.2-201ENST00000623941 599 ntBASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PARPBPQ9NWS1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms