Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 UNC93B2-201ENST00000285383 730 ntBASIC19.78■□□□□ 0.76
RTN4Q9NQC3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 AC108673.2-201ENST00000608909 565 ntBASIC19.78■□□□□ 0.76
RTN4Q9NQC3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN4Q9NQC3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 CCR12P-201ENST00000446203 998 ntBASIC19.77■□□□□ 0.76
RTN4Q9NQC3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4Q9NQC3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTN4Q9NQC3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC19.77■□□□□ 0.75
RTN4Q9NQC3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RTN4Q9NQC3 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms