Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 RPS2P52-201ENST00000469610 820 ntBASIC12.17□□□□□ -0.46
VAMP8Q9BV40 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 AL139327.4-201ENST00000612362 153 ntBASIC12.17□□□□□ -0.46
VAMP8Q9BV40 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 AL035685.1-201ENST00000636663 812 ntBASIC12.17□□□□□ -0.46
VAMP8Q9BV40 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 GGT4P-201ENST00000623672 1708 ntBASIC12.17□□□□□ -0.46
VAMP8Q9BV40 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VAMP8Q9BV40 AC005562.1-201ENST00000583030 3219 ntBASIC12.16□□□□□ -0.46
VAMP8Q9BV40 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 MIR193BHG-211ENST00000641433 5365 ntBASIC12.16□□□□□ -0.46
VAMP8Q9BV40 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 LINC02447-202ENST00000501888 2146 ntBASIC12.16□□□□□ -0.46
VAMP8Q9BV40 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 RAP2CP1-201ENST00000605103 478 ntBASIC12.16□□□□□ -0.46
VAMP8Q9BV40 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 AC118758.2-201ENST00000614242 2813 ntBASIC12.16□□□□□ -0.46
VAMP8Q9BV40 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.16□□□□□ -0.46
VAMP8Q9BV40 AC020658.6-201ENST00000623564 1870 ntBASIC12.16□□□□□ -0.46
VAMP8Q9BV40 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms