Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 KRT126P-201ENST00000549467 1181 ntBASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 AC004817.3-201ENST00000602957 2129 ntBASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 ATP5G2P1-201ENST00000433580 426 ntBASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 AL691432.3-201ENST00000621860 400 ntBASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFAF3Q9BU61 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 AC133963.1-201ENST00000504166 1679 ntBASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
NDUFAF3Q9BU61 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms