Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 ARMC10P1-201ENST00000313754 855 ntBASIC10.01□□□□□ -0.81
LIMD2Q9BT23 PPIH-202ENST00000372549 327 ntTSL 3 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 CDV3-207ENST00000508481 661 ntTSL 3 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AC073592.5-201ENST00000624854 528 ntBASIC10.01□□□□□ -0.81
LIMD2Q9BT23 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AC116353.5-201ENST00000638148 1699 ntBASIC10.01□□□□□ -0.81
LIMD2Q9BT23 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AC105020.1-201ENST00000435356 2205 ntBASIC10.01□□□□□ -0.81
LIMD2Q9BT23 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
LIMD2Q9BT23 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC10□□□□□ -0.81
LIMD2Q9BT23 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC10□□□□□ -0.81
LIMD2Q9BT23 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC10□□□□□ -0.81
LIMD2Q9BT23 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC10□□□□□ -0.81
LIMD2Q9BT23 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC10□□□□□ -0.81
LIMD2Q9BT23 AL020989.1-201ENST00000422979 469 ntBASIC10□□□□□ -0.81
LIMD2Q9BT23 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC10□□□□□ -0.81
LIMD2Q9BT23 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC10□□□□□ -0.81
LIMD2Q9BT23 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC10□□□□□ -0.81
LIMD2Q9BT23 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC10□□□□□ -0.81
LIMD2Q9BT23 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10□□□□□ -0.81
LIMD2Q9BT23 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
LIMD2Q9BT23 LINC01711-201ENST00000598340 967 ntBASIC10□□□□□ -0.81
LIMD2Q9BT23 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC10□□□□□ -0.81
LIMD2Q9BT23 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10□□□□□ -0.81
LIMD2Q9BT23 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC10□□□□□ -0.81
LIMD2Q9BT23 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
LIMD2Q9BT23 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10□□□□□ -0.81
LIMD2Q9BT23 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC10□□□□□ -0.81
LIMD2Q9BT23 AL049757.1-201ENST00000616842 1596 ntBASIC10□□□□□ -0.81
LIMD2Q9BT23 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC10□□□□□ -0.81
LIMD2Q9BT23 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10□□□□□ -0.81
LIMD2Q9BT23 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 AC022188.1-201ENST00000620960 1664 ntBASIC9.99□□□□□ -0.81
LIMD2Q9BT23 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 KRT8P10-201ENST00000450021 1447 ntBASIC9.99□□□□□ -0.81
LIMD2Q9BT23 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms