Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MUC4Q99102 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MUC4Q99102 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MUC4Q99102 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.21□□□□□ -0.46
MUC4Q99102 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.21□□□□□ -0.46
MUC4Q99102 AL365203.3-201ENST00000609742 2057 ntBASIC12.21□□□□□ -0.46
MUC4Q99102 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MUC4Q99102 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.21□□□□□ -0.46
MUC4Q99102 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
MUC4Q99102 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MUC4Q99102 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
MUC4Q99102 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.21□□□□□ -0.46
MUC4Q99102 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.21□□□□□ -0.46
MUC4Q99102 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
MUC4Q99102 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
MUC4Q99102 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MUC4Q99102 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
MUC4Q99102 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
MUC4Q99102 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.21□□□□□ -0.46
MUC4Q99102 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MUC4Q99102 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.46
MUC4Q99102 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MUC4Q99102 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
MUC4Q99102 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 AKR1C7P-201ENST00000305623 895 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
MUC4Q99102 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 AC132008.2-207ENST00000454517 770 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
MUC4Q99102 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 AC091304.2-201ENST00000564639 760 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.2□□□□□ -0.46
MUC4Q99102 AP001160.2-201ENST00000596071 487 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 AP000867.4-201ENST00000641616 219 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 GGT3P-204ENST00000453783 1664 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.2□□□□□ -0.46
MUC4Q99102 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 AL035633.1-201ENST00000406139 838 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 AL031284.1-201ENST00000419297 478 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 AC018712.1-201ENST00000455767 687 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.2□□□□□ -0.46
MUC4Q99102 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.2□□□□□ -0.46
MUC4Q99102 AL121772.3-201ENST00000610840 674 ntBASIC12.2□□□□□ -0.46
MUC4Q99102 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.2□□□□□ -0.46
MUC4Q99102 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MUC4Q99102 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
MUC4Q99102 KRT8P49-201ENST00000604166 1432 ntBASIC12.19□□□□□ -0.46
MUC4Q99102 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.19□□□□□ -0.46
MUC4Q99102 SNX33P1-201ENST00000592116 1762 ntBASIC12.19□□□□□ -0.46
MUC4Q99102 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MUC4Q99102 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MUC4Q99102 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MUC4Q99102 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MUC4Q99102 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MUC4Q99102 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.19□□□□□ -0.46
MUC4Q99102 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.19□□□□□ -0.46
MUC4Q99102 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.19□□□□□ -0.46
MUC4Q99102 KRT18P67-201ENST00000432816 1264 ntBASIC12.19□□□□□ -0.46
MUC4Q99102 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms