Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP6Q96FZ7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.83■□□□□ 0.29
CHMP6Q96FZ7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP6Q96FZ7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP6Q96FZ7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP6Q96FZ7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP6Q96FZ7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 AK4P3-201ENST00000418260 669 ntBASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 AC117947.1-201ENST00000427448 529 ntBASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 AL359075.1-203ENST00000462729 1002 ntBASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 AC012306.2-201ENST00000609350 630 ntBASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP6Q96FZ7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 AL391807.1-203ENST00000604392 2365 ntBASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 SPDYE15P-201ENST00000424157 909 ntBASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 KRT18P48-201ENST00000434763 852 ntBASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms