Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 AC087499.1-201ENST00000418141 1075 ntBASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 SLC25A3P1-201ENST00000443844 931 ntBASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 VENTXP5-201ENST00000523979 775 ntBASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 AC011558.1-201ENST00000623459 338 ntBASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 KRT18P22-201ENST00000402024 1347 ntBASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 SSR4P1-203ENST00000599569 2260 ntBASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CKAP2Q8WWK9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 AP002414.2-201ENST00000591780 3365 ntBASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 AC211429.1-201ENST00000415277 523 ntBASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 LINC01023-201ENST00000606054 436 ntBASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 AC006486.2-201ENST00000624246 2199 ntBASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CKAP2Q8WWK9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 AC133561.5-201ENST00000635547 218 ntBASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms