Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 AC093004.1-201ENST00000508850 424 ntBASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 AL589739.1-201ENST00000607720 493 ntBASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 AC021097.1-201ENST00000607902 574 ntBASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 RPL37AP1-201ENST00000412502 279 ntBASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 KRT18P34-201ENST00000488218 1270 ntBASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNIP1Q8TAD8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 AC104581.1-202ENST00000635932 2618 ntBASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNIP1Q8TAD8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms