Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 RHOQP3-201ENST00000437982 621 ntBASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 AC096734.2-201ENST00000562054 433 ntBASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 RNU1-129P-201ENST00000384064 167 ntBASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 U1.21-201ENST00000580816 167 ntBASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 FAM197Y3-203ENST00000618346 717 ntBASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 AL645728.2-201ENST00000641974 660 ntBASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 AL391005.1-201ENST00000623953 2435 ntBASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 PCGF3-213ENST00000620529 1899 ntBASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 AC026691.1-201ENST00000602502 2017 ntBASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH19Q8TAB3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 MIR1233-2-201ENST00000408138 82 ntBASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 MIR1233-1-201ENST00000408722 82 ntBASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 AL591424.1-201ENST00000442569 1213 ntBASIC17.17■□□□□ 0.34
PCDH19Q8TAB3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms