Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BEST4Q8NFU0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 FRMD8P1-201ENST00000440433 1524 ntBASIC14.46□□□□□ -0.09
BEST4Q8NFU0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 ME2P1-201ENST00000426028 1970 ntBASIC14.46□□□□□ -0.09
BEST4Q8NFU0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 LIN28AP1-201ENST00000429574 405 ntBASIC14.46□□□□□ -0.09
BEST4Q8NFU0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 AL359075.1-203ENST00000462729 1002 ntBASIC14.46□□□□□ -0.09
BEST4Q8NFU0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 AL603832.2-201ENST00000566195 2125 ntBASIC14.46□□□□□ -0.09
BEST4Q8NFU0 AC005332.3-201ENST00000589904 676 ntBASIC14.46□□□□□ -0.09
BEST4Q8NFU0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST4Q8NFU0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 PRAL-201ENST00000624952 3286 ntBASIC14.46□□□□□ -0.1
BEST4Q8NFU0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST4Q8NFU0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 GPR89P-201ENST00000407924 1495 ntBASIC14.45□□□□□ -0.1
BEST4Q8NFU0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 AC103564.2-201ENST00000432853 1299 ntBASIC14.45□□□□□ -0.1
BEST4Q8NFU0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BEST4Q8NFU0 AC122714.2-201ENST00000502787 707 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms