Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.62■□□□□ 0.25
APLFQ8IW19 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.61■□□□□ 0.25
APLFQ8IW19 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.61■□□□□ 0.25
APLFQ8IW19 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.61■□□□□ 0.25
APLFQ8IW19 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APLFQ8IW19 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.61■□□□□ 0.25
APLFQ8IW19 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.61■□□□□ 0.25
APLFQ8IW19 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.61■□□□□ 0.25
APLFQ8IW19 AC034105.1-201ENST00000563488 319 ntBASIC16.61■□□□□ 0.25
APLFQ8IW19 AC025062.2-201ENST00000605477 670 ntBASIC16.61■□□□□ 0.25
APLFQ8IW19 AC008735.5-201ENST00000623544 497 ntBASIC16.61■□□□□ 0.25
APLFQ8IW19 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APLFQ8IW19 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
APLFQ8IW19 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
APLFQ8IW19 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.61■□□□□ 0.25
APLFQ8IW19 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
APLFQ8IW19 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APLFQ8IW19 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APLFQ8IW19 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.61■□□□□ 0.25
APLFQ8IW19 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.6■□□□□ 0.25
APLFQ8IW19 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
APLFQ8IW19 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
APLFQ8IW19 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.6■□□□□ 0.25
APLFQ8IW19 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.6■□□□□ 0.25
APLFQ8IW19 MED15P5-201ENST00000423150 992 ntBASIC16.6■□□□□ 0.25
APLFQ8IW19 AC098831.1-202ENST00000438821 336 ntBASIC16.6■□□□□ 0.25
APLFQ8IW19 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.6■□□□□ 0.25
APLFQ8IW19 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.6■□□□□ 0.25
APLFQ8IW19 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
APLFQ8IW19 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.6■□□□□ 0.25
APLFQ8IW19 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.6■□□□□ 0.25
APLFQ8IW19 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 AC140113.2-201ENST00000604370 208 ntBASIC16.6■□□□□ 0.25
APLFQ8IW19 Z83851.2-201ENST00000609564 659 ntBASIC16.6■□□□□ 0.25
APLFQ8IW19 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.6■□□□□ 0.25
APLFQ8IW19 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 AC005915.1-201ENST00000624912 2018 ntBASIC16.6■□□□□ 0.25
APLFQ8IW19 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.6■□□□□ 0.25
APLFQ8IW19 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.6■□□□□ 0.25
APLFQ8IW19 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APLFQ8IW19 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.59■□□□□ 0.25
APLFQ8IW19 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.59■□□□□ 0.25
APLFQ8IW19 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.59■□□□□ 0.25
APLFQ8IW19 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
APLFQ8IW19 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
APLFQ8IW19 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
APLFQ8IW19 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms