Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 AC002310.6-201ENST00000624451 1377 ntBASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 GGT4P-201ENST00000623672 1708 ntBASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 AC104640.1-201ENST00000562617 2109 ntBASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 AL671710.1-201ENST00000610245 2349 ntBASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUDCD3Q8IVD9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 AC006449.6-201ENST00000612330 2296 ntBASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 SPDYE21P-201ENST00000413323 827 ntBASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 AC104076.2-201ENST00000448912 469 ntBASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 AC243591.1-201ENST00000452967 1364 ntBASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NUDCD3Q8IVD9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms