Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 AL645608.8-201ENST00000606034 2086 ntBASIC18.53■□□□□ 0.56
TRIM50Q86XT4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 UGT1A2P-201ENST00000454886 866 ntBASIC18.53■□□□□ 0.56
TRIM50Q86XT4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 IGHV3-42-201ENST00000520410 361 ntBASIC18.53■□□□□ 0.56
TRIM50Q86XT4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 AC105233.2-201ENST00000523697 349 ntBASIC18.53■□□□□ 0.56
TRIM50Q86XT4 AF228730.5-201ENST00000530288 346 ntBASIC18.53■□□□□ 0.56
TRIM50Q86XT4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 AL645728.1-201ENST00000366221 2101 ntBASIC18.52■□□□□ 0.56
TRIM50Q86XT4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 PRYP6-201ENST00000514804 343 ntBASIC18.52■□□□□ 0.56
TRIM50Q86XT4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 AC073389.1-201ENST00000595595 795 ntBASIC18.52■□□□□ 0.56
TRIM50Q86XT4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRIM50Q86XT4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM50Q86XT4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRIM50Q86XT4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM50Q86XT4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM50Q86XT4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM50Q86XT4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TRIM50Q86XT4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM50Q86XT4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM50Q86XT4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 MIR661-201ENST00000384842 89 ntBASIC18.51■□□□□ 0.55
TRIM50Q86XT4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 BASP1P1-201ENST00000430708 665 ntBASIC18.51■□□□□ 0.55
TRIM50Q86XT4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 INGX-202ENST00000489074 768 ntBASIC18.51■□□□□ 0.55
TRIM50Q86XT4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 RARRES2P9-201ENST00000565168 469 ntBASIC18.51■□□□□ 0.55
TRIM50Q86XT4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 AJ011932.1-201ENST00000621707 465 ntBASIC18.51■□□□□ 0.55
TRIM50Q86XT4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 AP3S2-216ENST00000617003 1561 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms