Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD2Q7Z408 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD2Q7Z408 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.82□□□□□ -0.2
CSMD2Q7Z408 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CSMD2Q7Z408 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AL365330.1-201ENST00000607459 531 ntBASIC13.81□□□□□ -0.2
CSMD2Q7Z408 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AC138627.1-207ENST00000641560 1006 ntBASIC13.81□□□□□ -0.2
CSMD2Q7Z408 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 AC108860.2-201ENST00000562760 2183 ntBASIC13.81□□□□□ -0.2
CSMD2Q7Z408 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CSMD2Q7Z408 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 KRT18P55-202ENST00000578578 1546 ntBASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AC093525.9-201ENST00000624961 1746 ntBASIC13.8□□□□□ -0.2
CSMD2Q7Z408 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 PFN1P12-201ENST00000455938 534 ntBASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 MPRIPP1-201ENST00000452433 1089 ntBASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 MPDU1-223ENST00000582151 728 ntBASIC13.8□□□□□ -0.2
CSMD2Q7Z408 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 RPL17P11-201ENST00000417593 544 ntBASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 AL118558.3-201ENST00000607414 1079 ntBASIC13.8□□□□□ -0.2
CSMD2Q7Z408 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.8□□□□□ -0.2
CSMD2Q7Z408 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD2Q7Z408 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms